7FSH
SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z32367954
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9179 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 81.178, 49.476, 115.134 |
Unit cell angles | 90.00, 94.90, 90.00 |
Refinement procedure
Resolution | 114.710 - 2.110 |
R-factor | 0.1948 |
Rwork | 0.192 |
R-free | 0.24740 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 8blu |
RMSD bond length | 0.011 |
RMSD bond angle | 1.836 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 114.820 | 114.820 | 2.170 |
High resolution limit [Å] | 2.110 | 8.960 | 2.110 |
Rmerge | 0.122 | 0.044 | 0.920 |
Rmeas | 0.145 | 0.054 | 1.089 |
Rpim | 0.078 | 0.031 | 0.576 |
Total number of observations | 181304 | 2332 | 14626 |
Number of reflections | 52612 | ||
<I/σ(I)> | 13.2 | 54.8 | 2 |
Completeness [%] | 99.5 | 99.9 | 95.3 |
Redundancy | 3.4 | 3.1 | 3.6 |
CC(1/2) | 0.972 | 0.946 | 0.377 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 100 mM Morpheus amino acids, 100 mM Morpheus buffer system 1, 43% Morpheus precipitant mix 3 |