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7FSC

Structure of liver pyruvate kinase in complex with allosteric modulator 42

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-17
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.91788
Spacegroup nameC 1 2 1
Unit cell lengths209.159, 113.004, 189.435
Unit cell angles90.00, 91.14, 90.00
Refinement procedure
Resolution104.560 - 1.855
R-factor0.1996
Rwork0.198
R-free0.22210
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.870
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (16-JUL-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]104.559104.5592.031
High resolution limit [Å]1.8555.5581.855
Rmerge0.0810.0270.827
Rpim0.0490.0160.498
Total number of observations1039863
Number of reflections2820261410014102
<I/σ(I)>9.828.31.6
Completeness [%]94.8
Redundancy3.73.63.7
CC(1/2)0.9990.9990.624
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate

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