7FS8
Structure of liver pyruvate kinase in complex with allosteric modulator 21
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-15 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 206.748, 112.962, 187.947 |
| Unit cell angles | 90.00, 92.36, 90.00 |
Refinement procedure
| Resolution | 187.790 - 2.098 |
| R-factor | 0.2108 |
| Rwork | 0.209 |
| R-free | 0.23770 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.910 |
| Data reduction software | XDS |
| Data scaling software | STARANISO |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.4 (16-JUL-2021)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 103.287 | 103.287 | 2.276 |
| High resolution limit [Å] | 2.098 | 6.529 | 2.098 |
| Rmerge | 0.112 | 0.036 | 1.620 |
| Rpim | 0.035 | 0.011 | 0.510 |
| Total number of observations | 1891926 | ||
| Number of reflections | 171866 | 8591 | 8595 |
| <I/σ(I)> | 12.6 | 37.1 | 1.6 |
| Completeness [%] | 94.8 | ||
| Redundancy | 11 | 11.1 | 11.1 |
| CC(1/2) | 0.999 | 1.000 | 0.638 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate |






