7FHB
Structure of prenyltransferase from Streptomyces sp. (strain CL190) with bound GPP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-04-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.462, 78.360, 84.992 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.400 - 1.900 |
R-factor | 0.1786 |
Rwork | 0.176 |
R-free | 0.22210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zb6 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.150 | 1.900 |
Rmerge | 0.121 | 0.073 | 0.700 |
Rmeas | 0.132 | 0.079 | 0.780 |
Rpim | 0.051 | 0.030 | 0.335 |
Total number of observations | 156859 | ||
Number of reflections | 23861 | 1344 | 1077 |
<I/σ(I)> | 9.2 | ||
Completeness [%] | 98.8 | 100 | 89.2 |
Redundancy | 6.6 | 6.6 | 5 |
CC(1/2) | 0.993 | 0.465 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.1 M Sodium citrate tribasic dihydrate pH 5.0, 18% w/v PEG 20,000 |