7FDM
Crystal structure of transcription factor MYB29 in complex with MYC3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-25 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97930 |
Spacegroup name | P 32 |
Unit cell lengths | 85.247, 85.247, 57.017 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.900 - 2.500 |
R-factor | 0.2355 |
Rwork | 0.232 |
R-free | 0.26840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rru |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | REFMAC |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.041 | 0.026 | 0.421 |
Rmeas | 0.043 | 0.028 | 0.491 |
Rpim | 0.015 | 0.009 | 0.244 |
Total number of observations | 98697 | ||
Number of reflections | 15757 | 1617 | 1489 |
<I/σ(I)> | 11.6 | ||
Completeness [%] | 97.5 | 99.8 | 91.3 |
Redundancy | 6.3 | 9.7 | 3.3 |
CC(1/2) | 0.999 | 0.114 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES pH 7.0, 20% (w/v) PEG 6000, 0.2 M Sodium chloride |