Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7F8E

Crystal structure of YggS from Fusobacterium nucleatum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2019-07-24
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths37.929, 146.375, 74.128
Unit cell angles90.00, 93.36, 90.00
Refinement procedure
Resolution36.590 - 2.080
R-factor0.1742
Rwork0.172
R-free0.21910
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle0.873
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.5902.154
High resolution limit [Å]2.0802.080
Number of reflections470641175
<I/σ(I)>27.134.333
Completeness [%]97.6
Redundancy6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.82950.1M sodium acetate trihydrate pH4.8, 0.19M Ammonium Sulfate , 21% (w/v) PEG 4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon