7F6E
Crystal structure of metal-citrate-binding protein (MctA) of ABC transporter endogenously bound to Mg2+-citrate complex (Form I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2017-10-21 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.270, 144.250, 79.150 |
Unit cell angles | 90.00, 100.16, 90.00 |
Refinement procedure
Resolution | 52.980 - 1.770 |
R-factor | 0.1385 |
Rwork | 0.137 |
R-free | 0.17150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3c9h |
RMSD bond length | 0.014 |
RMSD bond angle | 1.811 |
Data reduction software | MOSFLM (7.3.0) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.980 | 52.930 | 1.800 |
High resolution limit [Å] | 1.770 | 9.710 | 1.770 |
Rmerge | 0.065 | 0.029 | 0.411 |
Rmeas | 0.072 | 0.032 | 0.458 |
Rpim | 0.030 | 0.013 | 0.198 |
Total number of observations | 3321 | 21491 | |
Number of reflections | 92348 | 613 | 4278 |
<I/σ(I)> | 15.2 | 36.4 | 3.3 |
Completeness [%] | 95.8 | 99.6 | 88.9 |
Redundancy | 5.3 | 5.4 | 5 |
CC(1/2) | 0.999 | 0.999 | 0.879 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.5 | 293 | 0.1 M sodium citrate tribasic dihydrate pH 5.5, 16% PEG 8000 |