7F3S
Crystal structure of Sth1 Bromodomain in complex with H3K14bz peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 1 |
Unit cell lengths | 23.621, 33.206, 42.449 |
Unit cell angles | 88.14, 83.72, 70.48 |
Refinement procedure
Resolution | 25.190 - 1.400 |
R-factor | 0.1647 |
Rwork | 0.164 |
R-free | 0.18200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kmj |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.420 |
High resolution limit [Å] | 1.400 | 3.800 | 1.400 |
Rmerge | 0.053 | 0.038 | 0.321 |
Rmeas | 0.057 | 0.041 | 0.348 |
Rpim | 0.021 | 0.015 | 0.133 |
Total number of observations | 154912 | ||
Number of reflections | 22042 | 1143 | 1054 |
<I/σ(I)> | 8.1 | ||
Completeness [%] | 92.5 | 95.8 | 90.2 |
Redundancy | 7 | 7.3 | 6.2 |
CC(1/2) | 0.998 | 0.946 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 289 | 25% (w/v) PEG 1500, 0.1M MIB/Hydrochloric acid |