7F1X
X-ray crystal structure of visual arrestin complexed with inositol 1,4,5-triphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-28 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 167.566, 187.702, 190.817 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.925 - 3.000 |
R-factor | 0.2077 |
Rwork | 0.206 |
R-free | 0.23880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cf1 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.560 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.700 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.075 | 0.469 |
Rmeas | 0.504 | |
Rpim | 0.030 | 0.183 |
Number of reflections | 59857 | 8712 |
<I/σ(I)> | 19.8 | |
Completeness [%] | 99.2 | |
Redundancy | 7.3 | |
CC(1/2) | 0.998 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 40 mM PIPES pH 7.2/0.6 M KCl/22% ethylene glycol/5.7% polyethylene glycol 6000/13% polyethylene glycol 200/4% polyethylene glycol 1000 |