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7F14

Crystal structure of isomerase Dcr3 complex with substrate analogue 3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.1
Spacegroup nameP 63 2 2
Unit cell lengths104.094, 104.094, 138.681
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.730 - 2.400
R-factor0.2117
Rwork0.207
R-free0.24890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7f0o
RMSD bond length0.008
RMSD bond angle1.018
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7302.490
High resolution limit [Å]2.4002.400
Rmerge0.0770.682
Number of reflections179291830
<I/σ(I)>25.74.7
Completeness [%]99.899.6
Redundancy19.920.5
CC(1/2)0.9990.940
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293100 mM Tris-HCl (pH8.5), 15% w/v PEG8000, 250 mM KF

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