7EZB
Thorarchaeota Rab bound to GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-05-28 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 |
Unit cell lengths | 68.791, 68.791, 66.346 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 17.200 - 1.500 |
Rwork | 0.154 |
R-free | 0.17400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bfk |
RMSD bond length | 0.007 |
RMSD bond angle | 0.953 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (V1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.103 | 1.012 |
Number of reflections | 56552 | 4850 |
<I/σ(I)> | 11.4 | 1.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 5.4 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 100 mM MES, pH 5.5, 250 mM NaCl, 13% PEG 8000, 5 mM GTP |