7EVC
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 60% GTP/40% GDP and 2 Na+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-11 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.227, 92.165, 102.927 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.100 - 1.250 |
Rwork | 0.171 |
R-free | 0.18670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6o2r |
RMSD bond length | 0.005 |
RMSD bond angle | 0.942 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.270 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.093 | 0.376 |
Rmeas | 0.102 | 0.479 |
Rpim | 0.040 | 0.291 |
Number of reflections | 104858 | 4207 |
<I/σ(I)> | 24.5 | |
Completeness [%] | 97.7 | 79.7 |
Redundancy | 5.9 | |
CC(1/2) | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25% PEG 1500, 0.1 M MMT, pH 9.0, soaked with 10 mM GTP for 72 h before freezing |