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7EQT

Crystal structure of capsid P domain of norovirus GI.3 DSV complexed with Gala1-3Galb1-4Glc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2020-11-06
DetectorRIGAKU SATURN 944
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths63.628, 101.048, 104.128
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.850 - 2.050
R-factor0.1812
Rwork0.179
R-free0.22510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7eqs
RMSD bond length0.004
RMSD bond angle1.258
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.090
High resolution limit [Å]2.0505.5602.050
Rmerge0.1210.0650.465
Rmeas0.1270.0680.544
Rpim0.0380.0200.272
Total number of observations445899
Number of reflections4216123351719
<I/σ(I)>6
Completeness [%]98.099.681.7
Redundancy10.611.63.4
CC(1/2)0.9900.825
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29315.5% (w/v) polyethylene glycol 3350, 0.2M Sodium tartrate dibasic dihydrate

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