Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EOG

Crystal structure of the Pepper aptamer in complex with HBC, iridium hexammine soak

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.102
Spacegroup nameC 1 2 1
Unit cell lengths92.925, 34.771, 58.552
Unit cell angles90.00, 128.11, 90.00
Refinement procedure
Resolution46.073 - 1.500
R-factor0.1934
Rwork0.192
R-free0.21820
Structure solution methodSAD
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.550
High resolution limit [Å]1.5003.2301.500
Rmerge0.1020.0750.726
Rmeas0.1100.0810.798
Rpim0.0410.0310.324
Number of reflections4159724271759
<I/σ(I)>4.3
Completeness [%]91.397.374.5
Redundancy6.66.85.2
CC(1/2)0.9960.695
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2890.1 M ammonium chloride, 0.005 M magnesium chloride, 0.025 M HEPES, pH 7.0, 1.25 M 1,6-hexanediol, 40% MPD

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon