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7EOF

Structure of CCDC25-DNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-12
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9788
Spacegroup nameP 21 21 21
Unit cell lengths74.028, 74.795, 103.618
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.177 - 2.733
R-factor0.2312
Rwork0.229
R-free0.26140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)de novo predition
RMSD bond length0.003
RMSD bond angle0.543
Data reduction softwareHKL-3000
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.10-2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0003.110
High resolution limit [Å]2.7303.000
Rmerge0.0990.987
Number of reflections130261182
<I/σ(I)>19.9
Completeness [%]100.0
Redundancy9.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.2M MES, 10% isopropanol, pH 6.0

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PDB entries from 2025-06-18

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