7ENB

iron and alpha-ketoglutarate-dependent endoperoxidase NvfI with different conformation

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PHOTON FACTORY BEAMLINE BL-1A
Synchrotron site	Photon Factory
Beamline	BL-1A
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-03-27
Detector	DECTRIS EIGER X 4M
Wavelength(s)	1.07
Spacegroup name	P 21 21 21
Unit cell lengths	47.747, 79.298, 154.524
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	45.620 - 2.300
R-factor	0.1826
Rwork	0.178
R-free	0.23490
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	7de2
RMSD bond length	0.004
RMSD bond angle	0.685
Data reduction software	XDS
Data scaling software	Aimless
Phasing software	PHASER
Refinement software	PHENIX (1.19.2_4158)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	47.850	2.380
High resolution limit [Å]	2.300	2.300
Rmerge	0.178	0.910
Number of reflections	26939	2619
<I/σ(I)>	8.7	2.1
Completeness [%]	100.0
Redundancy	7.6
CC(1/2)	0.994	0.729

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		283	50 mM HEPES pH 7.5, containing 20% PEG3350, 20 mM alpha-KG, 100 mM NaSCN