7EMK
Dendrorhynchus zhejiangensis ferritin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL18U |
Synchrotron site | NFPSS |
Beamline | BL18U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-23 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.96003 |
Spacegroup name | I 4 3 2 |
Unit cell lengths | 151.790, 151.790, 151.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.000 - 2.300 |
R-factor | 0.1536 |
Rwork | 0.152 |
R-free | 0.18830 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.476 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.153 | 0.069 | 0.787 |
Rmeas | 0.155 | 0.070 | 0.797 |
Rpim | 0.025 | 0.012 | 0.130 |
Total number of observations | 513539 | ||
Number of reflections | 13520 | 769 | 661 |
<I/σ(I)> | 7.2 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 38 | 32.7 | 37.4 |
CC(1/2) | 0.999 | 0.984 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 291.15 | 0.2 M calcium chloride dihydrate, 0.1 M HEPES sodium, pH 7.5, and 28% (v/v) polyethylene glycol 400 |