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7EII

Ancestral L-Lys oxidase K387A variant (L-Lys binding form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths85.829, 80.086, 87.986
Unit cell angles90.00, 90.42, 90.00
Refinement procedure
Resolution42.900 - 2.400
Rwork0.183
R-free0.23080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7eih
RMSD bond length0.007
RMSD bond angle1.460
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.9002.530
High resolution limit [Å]2.4002.400
Rmerge0.0870.421
Number of reflections467626740
<I/σ(I)>16.2
Completeness [%]99.8
Redundancy6.8
CC(1/2)0.9980.926
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525%(w/v) PEG3350, 0.1 M Tris-HCl (pH 8.5)

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PDB entries from 2024-05-15

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