7EE5
Crystal structure of Neu5Gc bound PltC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | H 3 |
Unit cell lengths | 189.094, 189.094, 41.207 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.760 - 1.240 |
R-factor | 0.1393 |
Rwork | 0.138 |
R-free | 0.16040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wht |
RMSD bond length | 0.016 |
RMSD bond angle | 1.945 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.760 | 1.285 |
High resolution limit [Å] | 1.240 | 1.240 |
Rmeas | 0.068 | 0.521 |
Number of reflections | 155226 | 15252 |
<I/σ(I)> | 31.3 | |
Completeness [%] | 99.7 | |
Redundancy | 9.8 | 7.9 |
CC(1/2) | 1.000 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 291 | 34% PEG500MME and 0.1M sodium citrate |