7EDV
DNA duplex containing C-G-Au-C base triple
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 38.595, 38.595, 46.688 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.180 - 2.010 |
R-factor | 0.1672 |
Rwork | 0.164 |
R-free | 0.19100 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | AutoSol |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.180 | 27.180 | 2.060 |
High resolution limit [Å] | 2.010 | 8.980 | 2.010 |
Rmerge | 0.054 | 0.033 | 0.290 |
Rmeas | 0.057 | 0.035 | 0.306 |
Total number of observations | 52884 | ||
Number of reflections | 5183 | 60 | 354 |
<I/σ(I)> | 27.74 | 50.92 | 9.1 |
Completeness [%] | 100.0 | 96.8 | 100 |
Redundancy | 10.203 | 10.85 | 10.155 |
CC(1/2) | 0.999 | 1.000 | 0.980 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | sodium cacodylate, MPD, spermine tetrahydrochloride, lithium chloride |