7ECL
RNA duplex containing C-Ag-A and U-Ag-A base pair
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-26 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 43.252, 43.252, 378.967 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.110 - 3.010 |
R-factor | 0.2255 |
Rwork | 0.218 |
R-free | 0.29250 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.110 | 42.110 | 3.080 |
High resolution limit [Å] | 3.010 | 13.450 | 3.010 |
Rmerge | 0.081 | 0.028 | 0.330 |
Rmeas | 0.092 | 0.034 | 0.370 |
Total number of observations | 41779 | ||
Number of reflections | 9049 | 136 | 669 |
<I/σ(I)> | 10.6 | 19.84 | 3.2 |
Completeness [%] | 99.5 | 96.5 | 98.2 |
Redundancy | 4.617 | 3.015 | 4.91 |
CC(1/2) | 0.999 | 1.000 | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | MOPS, MPD, spermine, lithium nitrate |