7EBI
Chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitotetraose.
Replaces: 6LZRExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-08 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.99984 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.877, 57.107, 82.134 |
Unit cell angles | 90.00, 99.54, 90.00 |
Refinement procedure
Resolution | 24.490 - 1.500 |
R-factor | 0.1745 |
Rwork | 0.174 |
R-free | 0.19170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yqw |
RMSD bond length | 0.006 |
RMSD bond angle | 1.067 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmeas | 0.076 | 0.506 |
Rpim | 0.040 | 0.312 |
Number of reflections | 89117 | 4293 |
<I/σ(I)> | 19.99 | |
Completeness [%] | 97.8 | 95.7 |
Redundancy | 3.4 | 2.3 |
CC(1/2) | 0.762 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 293 | 1.63mM chitotetramer, 0.06M Divalents (MgCl2, CaCl2), 0.1M Buffer System 1 (Imidazole, MES (acid)), pH 6.5, 30% v/v Precipitant Mix 2 (Ethylene glycol, PEG 8000) |