7EAQ
DNA quadruplex composed of i-motif and Z-DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-23 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 0.98 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 30.129, 30.129, 174.064 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.690 - 2.390 |
R-factor | 0.247 |
Rwork | 0.241 |
R-free | 0.29630 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.690 | 29.690 | 2.450 |
High resolution limit [Å] | 2.390 | 10.700 | 2.390 |
Rmerge | 0.081 | 0.038 | 0.299 |
Rmeas | 0.086 | 0.040 | 0.315 |
Total number of observations | 38340 | ||
Number of reflections | 3619 | 53 | 235 |
<I/σ(I)> | 16.23 | 22.82 | 5 |
Completeness [%] | 99.5 | 94.6 | 94.4 |
Redundancy | 10.594 | 7.679 | 9.468 |
CC(1/2) | 0.999 | 1.000 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | MPD, ammonium chloride, sodium cacodylate, spermine tetrahydrochloride |