7E28
Crystal structure of SDR family NAD(P)-dependent oxidoreductase from Exiguobacterium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-07-01 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 86.988, 134.969, 81.453 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.490 - 1.830 |
R-factor | 0.2325 |
Rwork | 0.231 |
R-free | 0.26350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7e24 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.904 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.410 | 1.860 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.138 | 1.571 |
Rmeas | 0.151 | |
Rpim | 0.061 | |
Number of reflections | 42165 | 1895 |
<I/σ(I)> | 6.9 | 0.3 |
Completeness [%] | 99.0 | |
Redundancy | 5.8 | |
CC(1/2) | 0.995 | 0.412 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | PEG 3350, tris |