7DZV
Cyrstal structure of PETase E186A mutant from Rhizobacter gummiphilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-17 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.988, 54.627, 108.887 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.250 - 1.600 |
R-factor | 0.1341 |
Rwork | 0.133 |
R-free | 0.15710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dzt |
RMSD bond length | 0.015 |
RMSD bond angle | 2.006 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
High resolution limit [Å] | 1.600 | 4.340 | 1.600 |
Rmerge | 0.096 | 0.057 | 0.365 |
Rmeas | 0.100 | 0.060 | 0.379 |
Rpim | 0.028 | 0.019 | 0.103 |
Total number of observations | 505354 | ||
Number of reflections | 40798 | 2235 | 1978 |
<I/σ(I)> | 14.2 | ||
Completeness [%] | 99.4 | 99.2 | 97.5 |
Redundancy | 12.4 | 10.7 | 12.9 |
CC(1/2) | 0.998 | 0.985 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 298 | Sodium citrate tribasic, Tris, NaCl |