7DXM
Crystal structure of DltD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 81 |
Detector technology | PIXEL |
Collection date | 2020-07-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97929 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.273, 109.920, 282.377 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.960 |
Rwork | 0.216 |
R-free | 0.22800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bma |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.010 |
High resolution limit [Å] | 2.960 | 2.960 |
Rmeas | 0.215 | |
Rpim | 0.105 | 0.573 |
Number of reflections | 38815 | 1904 |
<I/σ(I)> | 10.85 | 1.5 |
Completeness [%] | 99.2 | |
Redundancy | 4 | |
CC(1/2) | 0.984 | 0.554 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% glycerol, 14% [w/v] PEG6000, 170 mM (NH4)2SO4) |