7DR8
Crystal structure of MERS-CoV 3CL protease in spacegroup P212121
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-12-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979183 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.908, 94.680, 97.674 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.848 - 2.338 |
R-factor | 0.21629118908 |
Rwork | 0.214 |
R-free | 0.26699 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wmd |
RMSD bond length | 0.008 |
RMSD bond angle | 0.953 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.850 | 2.460 |
High resolution limit [Å] | 2.338 | 2.340 |
Rpim | 0.055 | 0.439 |
Number of reflections | 32039 | 4613 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 100.0 | |
Redundancy | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 298 | 0.2M Sodium formate, 0.1M BICINE pH8.5 20% PEG5000 |