7DMK
PL6 alginate lyase BcAlyPL6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 83.688, 97.693, 103.561 |
Unit cell angles | 76.56, 86.45, 88.69 |
Refinement procedure
Resolution | 49.420 - 2.213 |
R-factor | 0.1688 |
Rwork | 0.167 |
R-free | 0.21510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gkd |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.260 |
High resolution limit [Å] | 2.200 | 6.020 | 2.220 |
Rmerge | 0.067 | 0.027 | 0.515 |
Rmeas | 0.079 | 0.032 | 0.608 |
Rpim | 0.041 | 0.016 | 0.319 |
Number of reflections | 148419 | 7214 | 7585 |
<I/σ(I)> | 7.6 | ||
Completeness [%] | 93.8 | 91.2 | 95.7 |
Redundancy | 3.6 | 3.8 | 3.6 |
CC(1/2) | 0.996 | 0.899 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 291 | 0.2 M sodium malonate, 12% (w/v) PEG 3350, pH 5.7 |