7DKC
Stenotrophomonas maltophilia DPP7 in complex with Tyr-Tyr
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2017-04-15 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.850, 74.320, 153.320 |
Unit cell angles | 90.00, 94.15, 90.00 |
Refinement procedure
Resolution | 40.003 - 1.860 |
Rwork | 0.171 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dkb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.613 |
Data reduction software | xia2 (0.5.170) |
Data scaling software | XDS |
Phasing software | REFMAC (5.8.0267) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.040 | 1.810 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmerge | 0.072 | 0.872 |
Rmeas | 0.095 | |
Rpim | 0.047 | 0.629 |
Number of reflections | 143943 | 6357 |
<I/σ(I)> | 11.5 | 1.2 |
Completeness [%] | 98.7 | 87.9 |
Redundancy | 4 | 2.8 |
CC(1/2) | 0.998 | 0.445 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.2M Amm Acetate, 20%w/v PEG 8000 |