7DEY
Structure of Dicer from Pichia stipitis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-21 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.987 |
Spacegroup name | P 43 |
Unit cell lengths | 127.738, 127.738, 103.591 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.682 - 2.897 |
R-factor | 0.2374 |
Rwork | 0.235 |
R-free | 0.27180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4oog |
RMSD bond length | 0.009 |
RMSD bond angle | 1.170 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.950 |
High resolution limit [Å] | 2.897 | 2.900 |
Number of reflections | 37041 | 1824 |
<I/σ(I)> | 20.52 | |
Completeness [%] | 99.0 | |
Redundancy | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297 | 3.6 M NaCl and 0.1 M sodium acetate (pH 5.4-5.6) |