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7D7K

The crystal structure of SARS-CoV-2 papain-like protease in apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 65 2 2
Unit cell lengths115.999, 115.999, 254.193
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.280 - 1.900
R-factor0.1835
Rwork0.183
R-free0.20740
Structure solution methodSAD
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.28049.2801.950
High resolution limit [Å]1.9008.4801.900
Rmerge0.1280.0283.853
Rmeas0.1300.0283.901
Total number of observations3132886
Number of reflections7959310095697
<I/σ(I)>25.84104.421.66
Completeness [%]98.893.697.7
Redundancy39.36130.23940.079
CC(1/2)1.0001.0000.683
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION82930.1M Tris pH 8.0, 2.0M Ammonium sulfate, 0.033% w/v Caffeine, 0.033% w/v Dithioerythritol, 0.033% w/v L-Methionine

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