7D5J
CRYSTAL STRUCTURE OF R220A VARIANT PENA BETA-LACTAMASE FROM BURKHOLDERIA MULTIVORANS
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-12 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 1.000 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 123.343, 71.158, 84.541 |
| Unit cell angles | 90.00, 90.05, 90.00 |
Refinement procedure
| Resolution | 42.270 - 1.510 |
| R-factor | 0.1747 |
| Rwork | 0.174 |
| R-free | 0.19280 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3w4q |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.829 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX (1.18.2_3874) |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.270 | 1.530 |
| High resolution limit [Å] | 1.510 | 1.510 |
| Rmerge | 0.056 | 0.365 |
| Rmeas | 0.064 | 0.427 |
| Rpim | 0.056 | 0.218 |
| Number of reflections | 114986 | 5243 |
| <I/σ(I)> | 12.5 | 2.5 |
| Completeness [%] | 99.6 | 92.5 |
| Redundancy | 3.8 | 3.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 295 | 250microL reservoir (25% polyethylene glycol 8kDa (PEG 8000), 0.1 M MES at pH 6.5)), 4microL hanging drop (7.5 mg/ml protein, 12.5% PEG 8000, 0.05M MES at pH 6.5). Adding Acetone to the drop (final 4%) improved the crystal size and shape. |






