7D5D
Left-handed G-quadruplex containing one bulge
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 2 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-09-10 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 29.215, 40.037, 30.376 |
| Unit cell angles | 90.00, 115.87, 90.00 |
Refinement procedure
| Resolution | 27.330 - 1.180 |
| R-factor | 0.1212 |
| Rwork | 0.119 |
| R-free | 0.16790 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4u5m |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.979 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 27.330 | 1.224 |
| High resolution limit [Å] | 1.180 | 1.182 |
| Rmerge | 0.125 | 0.938 |
| Rmeas | 0.135 | 1.028 |
| Rpim | 0.052 | 0.415 |
| Number of reflections | 20747 | 2060 |
| <I/σ(I)> | 9 | |
| Completeness [%] | 99.7 | |
| Redundancy | 6.7 | |
| CC(1/2) | 0.996 | 0.500 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 297 | 0.04 M sodium cacodylate trihydrate pH 6.0, 55% v/v -2-methyl-2,4-pentanediol and 0.012 M spermine tetrahydrochloride |






