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7D2L

Crystal structure of the Cas12i1 R-loop complex before target DNA cleavage

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2019-10-16
DetectorADSC QUANTUM 315r
Wavelength(s)0.9792
Spacegroup nameC 2 2 21
Unit cell lengths129.192, 142.644, 209.517
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution59.030 - 2.750
R-factor0.2154
Rwork0.213
R-free0.26430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)the selenomethionine (SeMet)-labeled complex
Data reduction softwareXDS
Data scaling softwareAimless (0.7.1)
Phasing softwarePHENIX (1.13-2998)
Refinement softwareREFMAC (5.8.0222)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]59.0302.840
High resolution limit [Å]2.7502.750
Rmerge0.0700.761
Number of reflections505434567
<I/σ(I)>24.3
Completeness [%]100.0
Redundancy13.4
CC(1/2)0.9980.930
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2890.1M sodium citrate (pH5.5), PEG3350 (18%), 0.1M sodium citrate

220113

PDB entries from 2024-05-22

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