7CTM
Crystal structure of Thermotoga maritima alpha-glucuronidase (TM0752) in complex with NADH and D-glucuronic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-11-29 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 74.150, 80.590, 88.630 |
Unit cell angles | 90.00, 102.87, 90.00 |
Refinement procedure
Resolution | 36.798 - 1.850 |
R-factor | 0.1545 |
Rwork | 0.152 |
R-free | 0.19640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kcx |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.30) |
Phasing software | PHASER |
Refinement software | PHENIX (1.16) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.800 | 36.800 | 1.890 |
High resolution limit [Å] | 1.850 | 8.680 | 1.850 |
Rmerge | 0.123 | 0.022 | 0.868 |
Rmeas | 0.133 | 0.024 | 0.933 |
Rpim | 0.049 | 0.010 | 0.340 |
Total number of observations | 295957 | ||
Number of reflections | 40918 | 441 | 2614 |
<I/σ(I)> | 12.5 | 40.9 | 2.3 |
Completeness [%] | 94.2 | 98 | 89.6 |
Redundancy | 7.2 | 7.1 | 7.2 |
CC(1/2) | 0.997 | 1.000 | 0.686 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 293 | 14 % PEG 3350, 0.2 M trilithium citrate, 0.1 M imidazole with pH 5.8, 2-propanol |