7CT8
Crystal structure of apo CmoB from Vibrio Vulnificus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 11C |
Synchrotron site | PAL/PLS |
Beamline | 11C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 136.121, 89.896, 88.711 |
Unit cell angles | 90.00, 114.76, 90.00 |
Refinement procedure
Resolution | 48.420 - 2.100 |
R-factor | 0.1811 |
Rwork | 0.179 |
R-free | 0.21330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4qnx |
RMSD bond length | 0.008 |
RMSD bond angle | 1.522 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.110 | 0.062 | 1.054 |
Rmeas | 0.119 | 0.068 | 1.148 |
Rpim | 0.046 | 0.026 | 0.446 |
Total number of observations | 370749 | ||
Number of reflections | 56139 | 2881 | 2769 |
<I/σ(I)> | 5 | ||
Completeness [%] | 99.0 | 98.5 | 98.7 |
Redundancy | 6.6 | 6.7 | 6.1 |
CC(1/2) | 0.997 | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Sodium acetate trihydrate, Sodium formate |