7CNP
Crystal structure of Agrobacterium tumefaciens aconitase X (apo-form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.131, 73.150, 133.603 |
Unit cell angles | 90.00, 101.39, 90.00 |
Refinement procedure
Resolution | 41.064 - 1.600 |
R-factor | 0.177 |
Rwork | 0.175 |
R-free | 0.20510 |
Structure solution method | SAD |
Data scaling software | XDS |
Phasing software | AutoSol |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.556 | 45.556 | 1.700 |
High resolution limit [Å] | 1.600 | 4.780 | 1.600 |
Rmerge | 0.071 | 0.043 | 0.378 |
Rmeas | 0.099 | 0.060 | 0.521 |
Total number of observations | 602663 | ||
Number of reflections | 342014 | 12683 | 54800 |
<I/σ(I)> | 6.44 | 13.95 | 1.83 |
Completeness [%] | 95.4 | 94.1 | 94.4 |
Redundancy | 1.762 | 1.733 | 1.729 |
CC(1/2) | 0.994 | 0.994 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350, magnesium chloride, Bis-Tris |