7C73
Crystal structure of yak lactoperoxidase using data obtained from crystals soaked in MgCl2 at 2.70 A resolution
Replaces: 6LNVExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-09 |
Detector | MARRESEARCH |
Wavelength(s) | 0.97947 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.880, 79.930, 75.050 |
Unit cell angles | 90.00, 101.35, 90.00 |
Refinement procedure
Resolution | 47.577 - 2.700 |
Rwork | 0.218 |
R-free | 0.30630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6LNV |
RMSD bond length | 0.008 |
RMSD bond angle | 1.664 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.830 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.198 | 0.960 |
Number of reflections | 17274 | 1170 |
<I/σ(I)> | 5 | |
Completeness [%] | 98.0 | 96.8 |
Redundancy | 3.1 | 3 |
CC(1/2) | 0.960 | 0.536 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 298 | 0.2M CaCl2, 20% PEG 3350, tris-HCl, pH 8 |