Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7C0W

Crystal structure of a dinucleotide-binding protein (Y224A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2019-04-16
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths65.960, 58.060, 103.080
Unit cell angles90.00, 93.25, 90.00
Refinement procedure
Resolution54.150 - 2.100
R-factor0.2032
Rwork0.201
R-free0.25000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7c0f
RMSD bond length0.012
RMSD bond angle1.781
Data reduction softwareMOSFLM (7.2.2)
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]58.06058.0602.160
High resolution limit [Å]2.1008.9102.100
Rmerge0.1570.1050.471
Rmeas0.1810.1220.541
Rpim0.0890.0620.264
Total number of observations183894249414618
Number of reflections452316553648
<I/σ(I)>6.912.53.2
Completeness [%]99.099.797.6
Redundancy4.13.84
CC(1/2)0.9830.9820.797
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52770.2M ammonium phosphate, 0.1M sodium cacodylate pH 6.5, 30% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon