7BZV
Crystal structure of 2-aminomuconic 6-semialdehyde dehydrogenase from Pseudomonas species AP-3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2019-09-23 |
Detector | OXFORD RUBY CCD |
Wavelength(s) | 0.9793 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 181.526, 181.526, 181.157 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.536 - 1.988 |
R-factor | 0.1737 |
Rwork | 0.172 |
R-free | 0.20750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4npi |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.988 | 5.400 | 1.990 |
Rmerge | 0.085 | 0.039 | 0.839 |
Rmeas | 0.088 | 0.040 | 0.863 |
Rpim | 0.020 | 0.010 | 0.201 |
Number of reflections | 120102 | 6482 | 5904 |
<I/σ(I)> | 4.9 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 18.8 | 17.3 | 18.1 |
CC(1/2) | 0.999 | 0.882 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | ammonium sulfate, BIS-TRIS, Polyethylene glycol monomethyl ether 550 |