7BZL
GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with beta-L-arabinofuranose-configured cyclophellitol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-08 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 77.401, 77.401, 252.864 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.030 - 2.300 |
R-factor | 0.2184 |
Rwork | 0.216 |
R-free | 0.27330 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3wkx |
RMSD bond length | 0.007 |
RMSD bond angle | 1.537 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.030 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.148 | 2.607 |
Rpim | 0.069 | 0.855 |
Number of reflections | 40192 | 3892 |
<I/σ(I)> | 9.4 | 0.9 |
Completeness [%] | 100.0 | |
Redundancy | 9.8 | |
CC(1/2) | 0.998 | 0.712 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M MES-NaOH (pH 6.5), 0.7 M sodium citrate |