7BZ1
The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-08 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97940 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 121.638, 82.545, 163.716 |
Unit cell angles | 90.00, 110.77, 90.00 |
Refinement procedure
Resolution | 48.080 - 2.450 |
R-factor | 0.1898 |
Rwork | 0.186 |
R-free | 0.25960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j4n |
RMSD bond length | 0.009 |
RMSD bond angle | 1.654 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.500 |
High resolution limit [Å] | 2.440 | 6.670 | 2.460 |
Rmerge | 0.124 | 0.089 | 0.414 |
Rmeas | 0.139 | 0.099 | 0.463 |
Rpim | 0.060 | 0.042 | 0.202 |
Number of reflections | 50546 | 2691 | 2536 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 90.8 | 93.3 | 92.6 |
Redundancy | 5.1 | 5.1 | 5 |
CC(1/2) | 0.992 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.4 | 287 | 0.1 M Sodium acetate, 1.5 M Sodium formate, 0.08 M CaCl2 and 10% PEG 3350 |