7BR1
Hydroxynitrile lyase from Parafontaria laminate complexed with benzaldehyde prepared by cocrystallization
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.934, 32.763, 84.632 |
Unit cell angles | 90.00, 102.84, 90.00 |
Refinement procedure
Resolution | 41.980 - 1.250 |
R-factor | 0.1407 |
Rwork | 0.140 |
R-free | 0.14750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jhc |
RMSD bond length | 0.006 |
RMSD bond angle | 1.357 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 82.517 | 41.945 | 1.320 |
High resolution limit [Å] | 1.250 | 3.950 | 1.250 |
Rmerge | 0.022 | 0.839 | |
Rmeas | 0.058 | 0.025 | 0.916 |
Rpim | 0.022 | 0.010 | 0.362 |
Total number of observations | 556553 | 17797 | 77278 |
Number of reflections | 84891 | 2836 | 12324 |
<I/σ(I)> | 18.1 | 65.7 | 2.1 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 6.6 | 6.3 | 6.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | potassium thiocyanate, sodium acetate pH 5.5, 10% w/v PEG 8000, 10% w/v PEG 1000, benzaldehyde |