7BJK
Crystal structure of the chloroplastic Fe superoxide dismutase PAP9 from Arabidopsis thaliana.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976250 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 214.090, 83.010, 118.240 |
Unit cell angles | 90.00, 115.76, 90.00 |
Refinement procedure
Resolution | 48.200 - 2.250 |
R-factor | 0.1814 |
Rwork | 0.179 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1unf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.894 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.200 | 2.310 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.108 | 0.779 |
Number of reflections | 83998 | 5642 |
<I/σ(I)> | 7.87 | 1.03 |
Completeness [%] | 94.5 | 86 |
Redundancy | 3.82 | 2.32 |
CC(1/2) | 0.995 | 0.605 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG3350 from 15 to 19 %, 0.1 M BisTris pH 6.5, 0.2 M NaNO3 |