7BIG
Crystal structure of v13WRAP-T, a 7-bladed designer protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.933, 81.484, 87.424 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.520 - 1.800 |
R-factor | 0.1977 |
Rwork | 0.195 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ymu |
RMSD bond length | 0.004 |
RMSD bond angle | 0.727 |
Data reduction software | DIALS (3.0.4) |
Data scaling software | Aimless (CCP4Interface 6.5.000) |
Phasing software | PHASER (CCP4Interface 6.5.000) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.130 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.099 | 0.951 |
Rmeas | 0.103 | |
Rpim | 0.028 | 0.281 |
Number of reflections | 43750 | 2554 |
<I/σ(I)> | 15.4 | 2.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.967 | 12.24 |
CC(1/2) | 0.997 | 0.915 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 1.0 M Lithium chloride, 0.1 M HEPES pH7.0, 30% (w/v) PEG 6000 |