7BED

X-ray structure of WDR5 bound to the WDR5 win motif peptide

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	DIAMOND BEAMLINE I04
Synchrotron site	Diamond
Beamline	I04
Temperature [K]	100
Detector technology	PIXEL
Collection date	2016-01-25
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.9795
Spacegroup name	P 21 21 21
Unit cell lengths	49.008, 54.469, 117.140
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	27.230 - 1.260
R-factor	0.1596
Rwork	0.159
R-free	0.17130
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4ery
RMSD bond length	0.006
RMSD bond angle	0.997
Data reduction software	xia2 (0.4.0.0)
Data scaling software	Aimless (0.7.2)
Phasing software	PHASER (2.7.17)
Refinement software	PHENIX (1.19rc7_4070)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	27.230	1.280
High resolution limit [Å]	1.260	1.260
Rmerge	0.077	0.710
Rmeas	0.090	0.831
Rpim	0.045	0.424
Number of reflections	157708	4018
<I/σ(I)>	7.9	1.3
Completeness [%]	99.3	96.5
Redundancy	3.8	3.6
CC(1/2)	0.999	0.502

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	5.5	294	26% PEG 3350, 100mM Bis-Tris pH 5.5, 50mM (NH4)2SO4,WDR5 at 14,65 mg/ml with 2:1 (protein:well) drop ratio.