7B85
Crystal Structure of EGFR-WT in Complex with TAK-788
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-31 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9999 |
Spacegroup name | I 2 3 |
Unit cell lengths | 144.280, 144.280, 144.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.630 - 2.500 |
R-factor | 0.2161 |
Rwork | 0.215 |
R-free | 0.24400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6s8a |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.630 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.096 | 1.636 |
Number of reflections | 17435 | 1917 |
<I/σ(I)> | 14.93 | 2.01 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 10.34 | 10.35 |
CC(1/2) | 0.998 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.6 K-Na-tartrate, 100 mM Na-MES (pH 7.0), 6.2 mg/mL EGFR-WT (im 100 mM NaCl, 25 mM Tris-HCl, 10 % glycerol, 1 mM TCEP, pH 8.0, 1 ul reservoir + 1 ul solution Soaking-Experiment |