7AY0
Crystal structure of truncated USP1-UAF1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-09 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 41 |
Unit cell lengths | 119.570, 119.570, 195.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.780 - 3.600 |
R-factor | 0.2366 |
Rwork | 0.235 |
R-free | 0.26620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5CVN (side chains removed) 5cvl |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 84.550 | 3.754 |
High resolution limit [Å] | 3.600 | 3.602 |
Rmeas | 0.258 | 1.698 |
Rpim | 0.108 | 0.727 |
Number of reflections | 25470 | 1264 |
<I/σ(I)> | 6.4 | 1.7 |
Completeness [%] | 80.3 | 34.2 |
Redundancy | 5.7 | 5.4 |
CC(1/2) | 0.992 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 10% w/v PEG4000, 100 mM MES/Imidazole pH 6.0-6.5, 30 mM CaCl2, 30 mM MgCl2, 20-25% glycerol v/v |