Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AVN

Structure of marine actinobacteria clade rhodopsin (MacR) in orange form in P1 space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-13
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97241
Spacegroup nameP 1
Unit cell lengths40.686, 56.628, 57.386
Unit cell angles63.66, 78.98, 80.33
Refinement procedure
Resolution50.570 - 1.600
R-factor0.1769
Rwork0.175
R-free0.20440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jsi
RMSD bond length0.006
RMSD bond angle1.312
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.9801.630
High resolution limit [Å]1.6001.600
Rmerge0.0540.892
Rmeas0.0570.937
Rpim0.0170.284
Total number of observations641326
Number of reflections590482944
<I/σ(I)>23.2
Completeness [%]99.799.7
Redundancy10.910.6
CC(1/2)1.0000.772
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE2931.0 M NH4SO4, 0.1 M NaOAc pH 5.2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon