7AVN
Structure of marine actinobacteria clade rhodopsin (MacR) in orange form in P1 space group
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97241 |
Spacegroup name | P 1 |
Unit cell lengths | 40.686, 56.628, 57.386 |
Unit cell angles | 63.66, 78.98, 80.33 |
Refinement procedure
Resolution | 50.570 - 1.600 |
R-factor | 0.1769 |
Rwork | 0.175 |
R-free | 0.20440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jsi |
RMSD bond length | 0.006 |
RMSD bond angle | 1.312 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.980 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.054 | 0.892 |
Rmeas | 0.057 | 0.937 |
Rpim | 0.017 | 0.284 |
Total number of observations | 641326 | |
Number of reflections | 59048 | 2944 |
<I/σ(I)> | 23.2 | |
Completeness [%] | 99.7 | 99.7 |
Redundancy | 10.9 | 10.6 |
CC(1/2) | 1.000 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 1.0 M NH4SO4, 0.1 M NaOAc pH 5.2 |