7AUT
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 mutation K63A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979257 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 61.785, 61.785, 96.184 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.800 - 1.600 |
R-factor | 0.1916 |
Rwork | 0.191 |
R-free | 0.21090 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 7aui |
RMSD bond length | 0.008 |
RMSD bond angle | 1.444 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.090 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.055 | 0.698 |
Rpim | 0.016 | 0.190 |
Number of reflections | 28567 | 1393 |
<I/σ(I)> | 28.4 | 4.1 |
Completeness [%] | 99.7 | 99.2 |
Redundancy | 13.8 | 14.3 |
CC(1/2) | 0.999 | 0.905 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291 | 24% PEG 3350, 0.1M Sodium acetate pH 4.5, 0.1M NaCl. Protein buffer: 20 mM Tris pH 8.0, 150 mM NaCl, 1 mM DTT. |